Synthesis of 3-(3-hydroxyphenyl)pyrrolidine dopamine D3 receptor ligands with extended functionality for probing the secondary binding pocket

Bioorg Med Chem Lett. 2018 Jun 1;28(10):1897-1902. doi: 10.1016/j.bmcl.2018.03.084. Epub 2018 Apr 4.

Abstract

A series of 3-(3-hydroxyphenyl)pyrrolidine analogues which incorporate N-alkyl groups and N-butylamide-linked benzamide functionality have been synthesized and their in vitro binding affinities at human dopamine receptors have been evaluated. Our ligand design strategy was to take the 3-(3-hydroxyphenyl)pyrrolidine scaffold and extend functionality from the orthosteric binding site to the secondary binding pocket for enhancing affinity and selectivity for the D3 receptor. The N-alkyl analogues constitute a homologous series from N-pentyl to N-decyl to probe the length/bulk tolerance of the secondary binding pocket of the D3 receptor. Enantiomeric 3-(3-hydroxyphenyl)pyrrolidine analogues were also prepared in order to test the chirality preference of the orthosteric binding site for this scaffold. Benzamide analogues were prepared to enhance affinity and/or selectivity based upon the results of the homologous series.

Keywords: D(3) secondary binding pocket; Dopamine D(3) receptor selectivity; Dopamine receptors; Homologous series; Structure-activity relationships.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Humans
  • Ligands
  • Protein Binding
  • Protein Isoforms / chemistry
  • Protein Isoforms / metabolism
  • Pyrrolidines / chemical synthesis
  • Pyrrolidines / chemistry*
  • Pyrrolidines / metabolism
  • Receptors, Dopamine D3 / chemistry
  • Receptors, Dopamine D3 / metabolism*
  • Stereoisomerism
  • Structure-Activity Relationship

Substances

  • Ligands
  • Protein Isoforms
  • Pyrrolidines
  • Receptors, Dopamine D3
  • pyrrolidine